BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D06SP1|AL426025
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1716 0.0
>3x_Contig1604
Length = 15703
Score = 1716 bits (865), Expect = 0.0
Identities = 865/865 (100%)
Strand = Plus / Minus
Query: 5 cgaatgcgctaaaaaaggtcttgctccctctttctctgtatgctaatgtttcgattgaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6378 cgaatgcgctaaaaaaggtcttgctccctctttctctgtatgctaatgtttcgattgaga 6319
Query: 65 aactttgaatttcgagtttcataggaaaatgtacttcaataaaccaaataagctcaggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6318 aactttgaatttcgagtttcataggaaaatgtacttcaataaaccaaataagctcaggct 6259
Query: 125 gactacaaccagaaatatagtgtgtaaacaaaatgcatcaagtgaagtcattaaataaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6258 gactacaaccagaaatatagtgtgtaaacaaaatgcatcaagtgaagtcattaaataaaa 6199
Query: 185 gggaagatggatataataaacccagtatagattcttcacgaaatcagccaacttttctcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6198 gggaagatggatataataaacccagtatagattcttcacgaaatcagccaacttttctcc 6139
Query: 245 tatgccaccacgcgacatctgctgattagtcggtgtgtaaatcatagtccctcgagactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6138 tatgccaccacgcgacatctgctgattagtcggtgtgtaaatcatagtccctcgagactt 6079
Query: 305 cttgtatggttcataaatcttttctgcagccattgtctacctttttcttatcttcagcgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6078 cttgtatggttcataaatcttttctgcagccattgtctacctttttcttatcttcagcgt 6019
Query: 365 attcccttctataagtcaaaattgactccagtgtagtttagttcaatgttacaatcgcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6018 attcccttctataagtcaaaattgactccagtgtagtttagttcaatgttacaatcgcct 5959
Query: 425 tcttacaggatatcgtttactgatcaaccaaaatttacctgtattgcttctgttcttata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5958 tcttacaggatatcgtttactgatcaaccaaaatttacctgtattgcttctgttcttata 5899
Query: 485 ttcttcaatgtaaatattggtttttcatcaaccttaagaaatgtaaagtttaaaaaaggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5898 ttcttcaatgtaaatattggtttttcatcaaccttaagaaatgtaaagtttaaaaaaggt 5839
Query: 545 cgagagacgtgccgaatgacaataagaatcaaagtgtgtacataccgtttatacaataat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5838 cgagagacgtgccgaatgacaataagaatcaaagtgtgtacataccgtttatacaataat 5779
Query: 605 tgacttgaattaaaagaataaggacatcggtgcttcaatcagttcaggttgttttttttg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5778 tgacttgaattaaaagaataaggacatcggtgcttcaatcagttcaggttgttttttttg 5719
Query: 665 gtatgctatcggatgaactaatttcttttacccttggttacctatcatttgaatacacca 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5718 gtatgctatcggatgaactaatttcttttacccttggttacctatcatttgaatacacca 5659
Query: 725 aagaacgatcttcttttcgtctccttggtttcgtctcttgcattagaattagatgtagag 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5658 aagaacgatcttcttttcgtctccttggtttcgtctcttgcattagaattagatgtagag 5599
Query: 785 ttggagtcatgtttcatgcgttccatttctacagatcttctgacactggtgcgggaaaat 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5598 ttggagtcatgtttcatgcgttccatttctacagatcttctgacactggtgcgggaaaat 5539
Query: 845 gatgtcttattttttcgatgcttac 869
|||||||||||||||||||||||||
Sbjct: 5538 gatgtcttattttttcgatgcttac 5514
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7348
Number of Sequences: 1807
Number of extensions: 7348
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)